Skip to content

Overview of benchmarks

Currently the following benchmarks are part of omnibenchmark:

Benchmark_name Description Results Interactive results Orchestrator
Batch integration
image		 Methods to integrate/correct batch effects in sc-RNA-seq data omni_batch omni_batch omni_batch
Clustering
image		 Clustering methods for scRNA-seq data omniclustering omniclustering omniclustering
Clustering pinned
image		 Reproduced clustering methods for scRNA-seq data benchmark omniclustering_pinned omniclustering pinned
Iris example
image		 Example benchmark using the iris dataset iris iris iris
Spatial clustering
image		 Clustering methods for spatial transcriptomics data spatial clustering spatial_clustering spatial clustering

Omniverse

All projects and datasets that are currently part of omnibenchmark. Benchmarks can have all kinds of architectures and inter-benchmark connections (shared projects). Over the time the architecture of a benchmark can change and adapt.

Last update: December 6, 2023